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Issue DateTitleAuthor(s)Citation
2014An allometric relationship between the genome length and virion volume of virusesCui, Jie; Holmes, Edward; Schlub, Timothy; Biological Sciences; Sydney Institute for Emerging Infectious Diseases and Biosec; Central Clinical School: MedicineAn allometric relationship between the genome length and virion volume of viruses, Journal of Virology, vol.88, 11, 2014,pp 6403-6410
2014Analyses of evolutionary dynamics in viruses are hindered by a time-dependent bias in rate estimatesDuchene, Sebastian; Ho, Simon; Holmes, Edward; Biological Sciences; Biological Sciences; Sydney Institute for Emerging Infectious Diseases and BiosecAnalyses of evolutionary dynamics in viruses are hindered by a time-dependent bias in rate estimates, Proceedings of the Royal Society B: Biological Sciences, vol.281, 1786, 2014,pp 1-7
2014Analysis of viral (zucchini yellow mosaic virus) genetic diversity during systemic movement through a Cucurbita pepo vineHolmes, Edward; Dunham, Joseph P; Simmons, Heather E.; Stephenson, Andrew G; Sydney Institute for Emerging Infectious Diseases and BiosecAnalysis of viral (zucchini yellow mosaic virus) genetic diversity during systemic movement through a Cucurbita pepo vine, Virus Research, vol.191, C, 2014,pp 172-179
2014Arboretum and Puerto Almendras viruses: two novel rhabdoviruses isolated from mosquitoes in PeruHolmes, Edward; Aguilar, Patricia; Auguste, Albert; Castro-Llanos, Fanny; et al, Various; Fernandez, Roberto; Guevara, Carolina; Guzman, Hilda; Popov, Vsevolod; Vasilakis, Nikos; Widen, Steven; Wood, Thomas; Sydney Institute for Emerging Infectious Diseases and BiosecArboretum and Puerto Almendras viruses: two novel rhabdoviruses isolated from mosquitoes in Peru, The Journal of General Virology, vol.95, Pt4, 2014,pp 787-792
2014Avian oncogenesis induced by lymphoproliferative disease virus: A neglected or emerging retroviral pathogen?Holmes, Edward; Allison, Andrew; Brown, Justin; Cartoceti, Andrew; Crum, James; Fadly, Aly; Kevin, Keel; Lichtenwalner, Anne; Munk, Brandon; Nemeth, Nicole; Philips, Jamie; Thomas, Jesse; Welsh, Trista; Zavala, Guillermo; Sydney Institute for Emerging Infectious Diseases and BiosecAvian oncogenesis induced by lymphoproliferative disease virus: A neglected or emerging retroviral pathogen?, Virology, vol.450-451, N/A, 2014,pp 2-12
2014Biodiversity and evolution of Imjin virus and Thottapalayam virus in Crocidurinae shrews in Zhejiang Province, ChinaHolmes, Edward; Fan, Fei-Neng; Lin, Xian-Dan; Suna, Xiao-Yu; Wang, Wen; Ying, Xuhua; Zhang, Yong-Zhen; Zhou, Run-Hong; Sydney Institute for Emerging Infectious Diseases and BiosecBiodiversity and evolution of Imjin virus and Thottapalayam virus in Crocidurinae shrews in Zhejiang Province, China, Virus Research, vol.189, N/A, 2014,pp 114-120
2016Candidate essential genes in Burkholderia cenocepacia J2315 identified by genome-wide TraDISAbd El Ghany, Moataz; Lee, Kok-Wei; Naeem, Raeece; Nathan, Sheila; Pain, Arnab; Tan, Yung-Chie; Wong, Yee-Chin; Sydney Institute for Emerging Infectious Diseases and BiosecCandidate essential genes in Burkholderia cenocepacia J2315 identified by genome-wide TraDIS, Frontiers in Microbiology, vol.7, N/A, 2016,pp 1-14
2014Characterization of multidrug-resistant Klebsiella pneumoniae from Australia carrying blaNDM-1Ginn, Andrew; Iredell, Jonathan; Kamruzzaman, Muhammad; Partridge, Sally; Shoma, Shereen; Western Clinical School: Medicine (Westmead); Western Clinical School: Westmead Millennium Institute; Western Clinical School: Medicine (Westmead); Western Clinical School: Medicine (Westmead); Sydney Institute for Emerging Infectious Diseases and BiosecCharacterization of multidrug-resistant Klebsiella pneumoniae from Australia carrying blaNDM-1, Diagnostic microbiology and infectious disease, vol.78, 1, 2014,pp 93-97
2014Co-circulation of Hantaan, Kenkeme, and Khabarovsk Hantaviruses in Bolshoy Ussuriysky Island, ChinaHolmes, Edward; Gao, Jian-Hua; Guo, Wen-Ping; Hu, Man-Xia; Li, Ming; Li, Ming-Hui; Liang, Hui-Jie; Lu, M.-Q.; Tian, Xi-Feng; Wang, C Q; Wang, Wen; Yang, Jun; Zhang, Yong-Zhen; Sydney Institute for Emerging Infectious Diseases and BiosecCo-circulation of Hantaan, Kenkeme, and Khabarovsk Hantaviruses in Bolshoy Ussuriysky Island, China, Virus Research, vol.191, N/A, 2014,pp 51-58
2014Co-Circulation of Multiple Hemorrhagic Fever Diseases with Distinct Clinical Characteristics in Dandong, ChinaHolmes, Edward; Chen, Xiao-Ping; Chen, Zhi-Hai; et al, Various; He, Jin-Rong; Qin, Xin-Cheng; Shen, Yi; Song, Rui; Wang, Wen; Zhang, Jing-Shan; Zhao, Yong-Xiang; Sydney Institute for Emerging Infectious Diseases and BiosecCo-Circulation of Multiple Hemorrhagic Fever Diseases with Distinct Clinical Characteristics in Dandong, China, PloS One, vol.9, 2, 2014,pp 187-11
2018A complex mosaic of enteroviruses shapes community-acquired hand, foot and mouth disease transmission and evolution within a single hospitalBritton, Philip; Burrell, Rebecca; Cobbin, Joanna; Eden, John-Sebastian; Holmes, Edward; Jones, Cheryl A; Selvakumar, Kierrtana; Thosar, Deepali; Childrens Hospital Westmead: Paediatrics & Child Health; School of Medical Sciences: Pathology; Sydney Institute for Emerging Infectious Diseases and Biosec; School of Life and Environmental Sciences (SOLES); School of Life and Environmental Sciences (SOLES)A complex mosaic of enteroviruses shapes community-acquired hand, foot and mouth disease transmission and evolution within a single hospital, Virus Evolution, vol.4, 2, 2018,pp 1-11
2014Contact Heterogeneity, Rather Than Transmission Efficiency, Limits the Emergence and Spread of Canine Influenza VirusGeoghegan, Jemma Louise; Holmes, Edward; Arinaminpathy, Nimalan; Dalziel, Benjamin D.; Dubovi, Edward; Ellner, Stephen P.; Grenfell, Bryan; Huang, Kai-Kai; Parrish, Colin R; Biological Sciences; Sydney Institute for Emerging Infectious Diseases and BiosecContact Heterogeneity, Rather Than Transmission Efficiency, Limits the Emergence and Spread of Canine Influenza Virus, PLoS Pathogens, vol.10, 10, 2014,pp 1-13
2016Cryptococcal transmigration across a model brain blood-barrier: evidence of the Trojan horse mechanism and differences between Cryptococcus neoformans var grubii strain H99 and C gattii strain R265Combes, Valery; Dietmann, Anelia; Djordjevic, Julianne; Grau, Georges; Juillard, Pierre; Kaufman-Francis, Keren; Milonig, Alban; Sorrell, Tania; School of Medical Sciences: Pathology; School of Medical Sciences: Pathology; Western Clinical School: Westmead Institute for Medical Res; School of Medical Sciences: Pathology; Western Clinical School: Westmead Institute for Medical Res; Sydney Institute for Emerging Infectious Diseases and Biosec; School of Medical Sciences: Pathology; Western Clinical School: Westmead Institute for Medical ResCryptococcal transmigration across a model brain blood-barrier: evidence of the Trojan horse mechanism and differences between Cryptococcus neoformans var grubii strain H99 and C gattii strain R265, Microbes and Infection, vol.18, 1, 2016,pp 57-67
2013Dengue Virus in Sub-tropical Northern and Central Viet Nam: Population Immunity and Climate Shape Patterns of Viral Invasion and MaintenanceHolmes, Edward; Aaskov, John; Fox, Annette; Gibbons, Robert; Le, Hai Yen; Le, Mai Quynh; Nguyen, Thuy Thi Thu; Nguyen, Xuyen Thanh; Rabaa, Maia; Simmons, Cameron; Sydney Institute for Emerging Infectious Diseases and BiosecDengue Virus in Sub-tropical Northern and Central Viet Nam: Population Immunity and Climate Shape Patterns of Viral Invasion and Maintenance, PLoS Neglected Tropical Diseases, vol.7, 12, 2013,pp 1-12
2016Development and function of Foxp3+ regulatory T cellsAlexander, Stephen; Cao, Qi; Hapudeniya, Dhanushka; Harris, David; Hu, Min; Sawyer, Andrew; Wang, Ya; Wang, Yiping; Wang, Yuan; Zhang, Geoff; Zheng, Guoping; Zhou, Jimmy; Ghali, Joanna; Childrens Hospital Westmead: Paediatrics & Child Health; Western Clinical School: Medicine (Westmead); Childrens Hospital Westmead: Paediatrics & Child Health; Western Clinical School: Westmead Institute for Medical Res; Western Clinical School: Westmead Institute for Medical Res; Sydney Institute for Emerging Infectious Diseases and Biosec; Childrens Hospital Westmead: Paediatrics & Child Health; Western Clinical School: Westmead Institute for Medical Res; Childrens Hospital Westmead: Paediatrics & Child Health; Childrens Hospital Westmead: Medicine; Western Clinical School: Medicine (Westmead); Childrens Hospital Westmead: MedicineDevelopment and function of Foxp3+ regulatory T cells, Nephrology, vol.21, 2, 2016,pp 81-85
2013Diagnosis, treatment and prevention of tuberculosis in childrenBritton, Philip; Marais, Ben; Perez-Velez, Carlos; Children's Hospital Westmead: Paediatrics & Child Health; Children's Hospital Westmead: Medicine; Sydney Institute for Emerging Infectious Diseases and BiosecDiagnosis, treatment and prevention of tuberculosis in children, NSW Public Health Bulletin, vol.24, 1, 2013,pp 15-21
2017Drug resistance and Mycobacterium tuberculosis strain diversity in TB/HIV co-infected patients in Ho Chi Minh city, VietnamMai, Trinhquynh; Marais, Ben; Sintchenko, Vitali; Giang, Dochau; Hang, Pham Thi Thu; Hien, Nguyen Tran; Lan, Nguyen Thi Ngoc; Lan, Nguyenhuu; Van Anh, Nguyen Thi; Sydney Institute for Emerging Infectious Diseases and Biosec; Childrens Hospital Westmead: Medicine; Westmead Clinical School: MedicineDrug resistance and Mycobacterium tuberculosis strain diversity in TB/HIV co-infected patients in Ho Chi Minh city, Vietnam, Journal of Global Antimicrobial Resistance, vol.10, N/A, 2017,pp 154-160
2018The Early Innate Immune Response to, and Phagocyte-Dependent Entry of, Cryptococcus neoformans Map to the Perivascular Space of Cortical Post-Capillary Venules in NeurocryptococcosisDesmarini, Desmarini; Djordjevic, Julianne; Grau, Georges; Juillard, Pierre; Kaufman-Francis, Keren; Lev, Sophia; Sorrell, Tania; Westmead Clinical School: Medicine; Westmead Clinical School: Westmead Institute for Medical Res; School of Medical Sciences: Pathology; Westmead Clinical School: Westmead Institute for Medical Res; Sydney Institute for Emerging Infectious Diseases and Biosec; Westmead Clinical School: Medicine; Westmead Clinical School: Westmead Institute for Medical ResThe Early Innate Immune Response to, and Phagocyte-Dependent Entry of, Cryptococcus neoformans Map to the Perivascular Space of Cortical Post-Capillary Venules in Neurocryptococcosis, American Journal of Pathology, vol.188, 7, 2018,pp 1653-1665
2018The Early Innate Immune Response to, and Phagocyte-Dependent Entry of, Cryptococcus neoformans Map to the Perivascular Space of Cortical Post-Capillary Venules in NeurocryptococcosisDesmarini, Desmarini; Djordjevic, Julianne; Grau, Georges; Juillard, Pierre; Kaufman-Francis, Keren; Lev, Sophia; Sorrell, Tania; Westmead Clinical School: Medicine; Westmead Clinical School: Westmead Institute for Medical Res; School of Medical Sciences: Pathology; Westmead Clinical School: Westmead Institute for Medical Res; Sydney Institute for Emerging Infectious Diseases and Biosec; Westmead Clinical School: Medicine; Westmead Clinical School: Westmead Institute for Medical ResThe Early Innate Immune Response to, and Phagocyte-Dependent Entry of, Cryptococcus neoformans Map to the Perivascular Space of Cortical Post-Capillary Venules in Neurocryptococcosis, American Journal of Pathology, vol.188, 7, 2018,pp 1653-1665
2018The Early Innate Immune Response to, and Phagocyte-Dependent Entry of, Cryptococcus neoformans Map to the Perivascular Space of Cortical Post-Capillary Venules in NeurocryptococcosisDesmarini, Desmarini; Djordjevic, Julianne; Grau, Georges; Juillard, Pierre; Kaufman-Francis, Keren; Lev, Sophia; Sorrell, Tania; Westmead Clinical School: Medicine; Westmead Clinical School: Westmead Institute for Medical Res; School of Medical Sciences: Pathology; Westmead Clinical School: Westmead Institute for Medical Res; Sydney Institute for Emerging Infectious Diseases and Biosec; Westmead Clinical School: Medicine; Westmead Clinical School: Westmead Institute for Medical ResThe Early Innate Immune Response to, and Phagocyte-Dependent Entry of, Cryptococcus neoformans Map to the Perivascular Space of Cortical Post-Capillary Venules in Neurocryptococcosis, American Journal of Pathology, vol.188, 7, 2018,pp 1653-1665