Browsing by Author Ferenci, Thomas (Tom)

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Issue DateTitleAuthor(s)Citation
2003The activator of GntII genes for gluconate metabolism, GntH exerts negative control of GntR-Regulated GntI genes in Escherichia coliFerenci, Thomas (Tom); Izu, Hanae; Kawai, Takuya; Matsushita, Kazunobu; Tsunedomi, Ryouichi; Yamada, Mamoru; School of Molecular BioscienceThe activator of GntII genes for gluconate metabolism, GntH exerts negative control of GntR-Regulated GntI genes in Escherichia coli, Journal of Bacteriology, vol.185,(6),2003,pp 1783-1795
2008Alkaline phosphatase as a reporter of sigma(S) levels and rpoS polymorphisms in different E. coli strainsFerenci, Thomas (Tom); Spira, Beny; Molecular & Microbial BioscienAlkaline phosphatase as a reporter of sigma(S) levels and rpoS polymorphisms in different E. coli strains, Archives of Microbiology, vol.189,(1),2008,pp 43-47
2007Bacterial Physiology, Regulation and Mutational Adaptation in a Chemostat EnvironmentFerenci, Thomas (Tom); Molecular & Microbial BioscienBacterial Physiology, Regulation and Mutational Adaptation in a Chemostat Environment, Advances in Microbial Physiology, vol.53,(N/A),2007,pp 169-229
2013The basis of antagonistic pleiotropy in hfq mutations that have opposite effects on fitness at slow and fast growth ratesFerenci, Thomas (Tom); Maharjan, Ram; McKenzie, Christopher; Yeung, A; Molecular Bioscience; Molecular Bioscience; Molecular Bioscience; Molecular BioscienceThe basis of antagonistic pleiotropy in hfq mutations that have opposite effects on fitness at slow and fast growth rates, Heredity, vol.110, 1, 2013,pp 10-18
2013A case of adaptation through a mutation in a tandem duplication during experimental evolution in Escherichia coliFerenci, Thomas (Tom); Maharjan, Ram; Schliep, Martin; Feng, Lu; Gaffé, Joël; Plucain, Jessica; Schneider, Dominique; Tenaillon, Olivier; Wang, Lei; Molecular Bioscience; Molecular Bioscience; Biological SciencesA case of adaptation through a mutation in a tandem duplication during experimental evolution in Escherichia coli, BMC Genomics, vol.14, 1, 2013,pp 1-12
2006Clonal Adaptive Radiation in a Constant Environment.Ferenci, Thomas (Tom); Maharjan, Ram; Notley-McRobb, Lucinda; Seeto, Shona; Molecular & Microbial Bioscien; Molecular & Microbial Bioscien; Medicine; Molecular & Microbial BioscienClonal Adaptive Radiation in a Constant Environment., Science, vol.313,(5786),2006,pp 514-517
2005Comparative metabolome profiling using two dimensional thin layer chromatography (2DTLC)Ferenci, Thomas (Tom); Maharjan, Ram; School of Molecular Bioscience; School of Molecular BioscienceComparative metabolome profiling using two dimensional thin layer chromatography (2DTLC) in Metabolome Analyses - Strategies for Systems Biology, Springer Science + Business Media Inc., 2005, pp. 63-81
2006A cultural divide on the use of chemostatsFerenci, Thomas (Tom); Molecular & Microbial BioscienA cultural divide on the use of chemostats, Microbiology, vol.152,(5),2006,pp 1247-1248
2012Culture history and population heterogeneity as determinants of bacterial adaptation: the adaptomics of a single environmental transitionEydallin, Gustavo; Ferenci, Thomas (Tom); Ryall, Ben; Molecular Bioscience; Molecular Bioscience; Molecular BioscienceCulture history and population heterogeneity as determinants of bacterial adaptation: the adaptomics of a single environmental transition, Microbiology and Molecular Biology Reviews, vol.76, 3, 2012,pp 597-625
2013A design-constraint trade-off underpins the diversity in ecologically important traits in species Escherichia coliFerenci, Thomas (Tom); Phan, Katherine; Molecular Bioscience; Molecular BioscienceA design-constraint trade-off underpins the diversity in ecologically important traits in species Escherichia coli, The ISME Journal, vol.7, 10, 2013,pp 2034-2043
2007Divergence and redundancy of transport and metabolic rate-yield strategies in a single Escherichia coli populationFerenci, Thomas (Tom); Maharjan, Ram; Seeto, Shona; Molecular & Microbial Bioscien; Molecular & Microbial Bioscien; Molecular & Microbial BioscienDivergence and redundancy of transport and metabolic rate-yield strategies in a single Escherichia coli population, Journal of Bacteriology, vol.189,(6),2007,pp 2350-2358
2010Divergence Involving Global Regulatory Gene Mutations in an Escherichia Coli Population Evolving under Phosphate LimitationFerenci, Thomas (Tom); Maharjan, Ram; McKenzie, Christopher; Reeves, Peter; Spira, Beny; Feng, Lu; Li, Fangfang; Li, Xiaomin; Wang, Lei; Zhou, Zhemin; School of Molecular Bioscience; School of Molecular Bioscience; School of Molecular Bioscience; School of Molecular Bioscience; School of Molecular BioscienceDivergence Involving Global Regulatory Gene Mutations in an Escherichia Coli Population Evolving under Phosphate Limitation, Genome Biology and Evolution, vol.2, 1,pp 478-487
2005Divergent roles of RpoS in Escherichia coli under aerobic and anaerobic conditions.Ferenci, Thomas (Tom); King, Thea; Molecular & Microbial Bioscien; Molecular & Microbial BioscienDivergent roles of RpoS in Escherichia coli under aerobic and anaerobic conditions., FEMS Microbiology Letters, vol.244,(2),2005,pp 323-327
2003The effect of growth atmosphere on the ability of Listeria monocytogenes to survive exposure to acid, proteolytic enzymes and bile saltsFerenci, Thomas (Tom); King, Thea; Szabo, Elizabeth A; Molecular & Microbial Bioscien; Molecular & Microbial BioscienThe effect of growth atmosphere on the ability of Listeria monocytogenes to survive exposure to acid, proteolytic enzymes and bile salts, International Journal Of Food Microbiology, vol.84,(2),2003,pp 133-143
2002Enrichment and elimination of mutY mutators in Escherichia coli populationsFerenci, Thomas (Tom); Notley-McRobb, Lucinda; Seeto, Shona; Molecular & Microbial Bioscien; Medicine; Molecular & Microbial BioscienEnrichment and elimination of mutY mutators in Escherichia coli populations, Genetics: a periodical record of investigations bearing on heredity and variation, vol.162,(3),2002,pp 1055-1062
2013Epistatic interactions determine the mutational pathways and coexistence of lineages in clonal Escherichia coli populationsFerenci, Thomas (Tom); Maharjan, Ram; Molecular Bioscience; Molecular BioscienceEpistatic interactions determine the mutational pathways and coexistence of lineages in clonal Escherichia coli populations, Evolution, vol.67, 9, 2013,pp 2762-2768
2017The fitness costs and benefits of antibiotic resistance in drug-free microenvironments encountered in the human bodyFerenci, Thomas (Tom); Maharjan, Ram; School of Life and Environmental Sciences (SOLES); School of Molecular Bioscience (SMB)The fitness costs and benefits of antibiotic resistance in drug-free microenvironments encountered in the human body, Environmental Microbiology Reports, vol.9, 5, 2017,pp 635-641
2017The fitness costs and trade-off shapes associated with the exclusion of nine antibiotics by OmpF porin channelsFerenci, Thomas (Tom); Phan, Katherine; School of Life and Environmental Sciences (SOLES); School of Molecular Bioscience (SMB)The fitness costs and trade-off shapes associated with the exclusion of nine antibiotics by OmpF porin channels, The ISME Journal, vol.11, N/A, 2017,pp 1472-1482
2013The form of a trade-off determines the response to competitionFerenci, Thomas (Tom); Maharjan, Ram; Sung, Judy; Beardmore, Robert; Gudelj, Ivana; Haynes, Ken; Hurst, Laurence; Nilsson, Susanna; Molecular Bioscience; Molecular Bioscience; Biomedical SciencesThe form of a trade-off determines the response to competition, Ecology Letters, vol.16, 10, 2013,pp 1267-1276
2010Genomic Identification of a Novel Mutation in hfq That Provides Multiple Benefits in Evolving Glucose-Limited Populations of Escherichia coliFerenci, Thomas (Tom); Maharjan, Ram; McKenzie, Christopher David; Reeves, Peter; Gaffé, Joël; Li, Yang; Ren, Yan; Schneider, Dominique; Wang, Lei; Zhou, Zhemin; Molecular Bioscience; Molecular Bioscience; Molecular Bioscience; Molecular BioscienceGenomic Identification of a Novel Mutation in hfq That Provides Multiple Benefits in Evolving Glucose-Limited Populations of Escherichia coli, Journal of Bacteriology, vol.192, 17, 2010,pp 4517-4521