Browsing by Author Eden, John-Sebastian

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Issue DateTitleAuthor(s)Citation
2013Adaptive evolution of bat dipeptidyl peptidase 4 (dpp4): Implications for the origin and emergence of Middle East Respiratory Syndrome CoronavirusCui, Jie; Eden, John-Sebastian; Holmes, Edward; Wang, Lin-Fa; Biological Sciences; Biological Sciences; Biological SciencesAdaptive evolution of bat dipeptidyl peptidase 4 (dpp4): Implications for the origin and emergence of Middle East Respiratory Syndrome Coronavirus, Virology Journal, vol.10, N/A, 2013,pp 1-5
2016Benign Rabbit Caliciviruses Exhibit Evolutionary Dynamics Similar to Those of Their Virulent RelativesDuchene, Sebastian; Eden, John-Sebastian; Holmes, Edward; Kerr, Peter; Mahar, Jackie; Duckworth, J.A; Nicholson, Leila; Strive, Tanja; Ward, Vernon; Biological Sciences; Biological Sciences; School of Life and Environmental Sciences (SOLES); Molecular Bioscience; Biological SciencesBenign Rabbit Caliciviruses Exhibit Evolutionary Dynamics Similar to Those of Their Virulent Relatives, Journal of Virology, vol.90, 20, 2016,pp 9317-9329
2015Comparative phylodynamics of rabbit hemorrhagic disease virus in Australia and New ZealandEden, John-Sebastian; Holmes, Edward; Maher, Jackie; Swain, Grace; Duckworth, J.A; Kovaliski, John; Strive, Tanja; Biological Sciences; Biological Sciences; Biological Sciences; Biological SciencesComparative phylodynamics of rabbit hemorrhagic disease virus in Australia and New Zealand, Journal of Virology, vol.89, 18, 2015,pp 9548-9558
2018A complex mosaic of enteroviruses shapes community-acquired hand, foot and mouth disease transmission and evolution within a single hospitalBritton, Philip; Burrell, Rebecca; Cobbin, Joanna; Eden, John-Sebastian; Holmes, Edward; Jones, Cheryl A; Selvakumar, Kierrtana; Thosar, Deepali; Childrens Hospital Westmead: Paediatrics & Child Health; School of Medical Sciences: Pathology; Sydney Institute for Emerging Infectious Diseases and Biosec; School of Life and Environmental Sciences (SOLES); School of Life and Environmental Sciences (SOLES)A complex mosaic of enteroviruses shapes community-acquired hand, foot and mouth disease transmission and evolution within a single hospital, Virus Evolution, vol.4, 2, 2018,pp 1-11
2016Cross-validation to select Bayesian hierarchical models in phylogeneticsDi Giallonardo, Francesca; Duchene, David; Duchene, Sebastian; Eden, John-Sebastian; Geoghegan, Jemma Louise; Ho, Simon; Holmes, Edward; Holt, Kathryn E; Biological Sciences; Biological Sciences; Biological Sciences; Biological Sciences; Biological Sciences; School of Life and Environmental Sciences (SOLES); School of Life and Environmental Sciences (SOLES)Cross-validation to select Bayesian hierarchical models in phylogenetics, BMC Evolutionary Biology, vol.16, 1, 2016,pp 1-8
2016Cross-validation to select Bayesian hierarchical models in phylogeneticsDi Giallonardo, Francesca; Duchene, David; Duchene, Sebastian; Eden, John-Sebastian; Geoghegan, Jemma Louise; Ho, Simon; Holmes, Edward; Holt, Kathryn E; Biological Sciences; Biological Sciences; Biological Sciences; Biological Sciences; Biological Sciences; School of Life and Environmental Sciences (SOLES); School of Life and Environmental Sciences (SOLES)Cross-validation to select Bayesian hierarchical models in phylogenetics, BMC Evolutionary Biology, vol.16, 1, 2016,pp 1-8
2014The emergence and evolution of the novel epidemic norovirus GII.4 variant Sydney 2012Eden, John-Sebastian; Holmes, Edward; Boni, Maciej F; Greening, Gail; Hewitt, Joanne; Lim, Kun; Merif, Juan; Ratcliff, Rodney; Rawlinson, William D; Tanaka, Mark; White, Peter; Biological Sciences; Sydney Institute for Emerging Infectious Diseases and BiosecThe emergence and evolution of the novel epidemic norovirus GII.4 variant Sydney 2012, Virology, vol.450-451, N/A, 2014,pp 106-113
2017Emergent multisystemic Enterococcus infection threatens endangered Christmas Island reptile populationsAgius, Jessica; Eden, John-Sebastian; Phalen, David; Hall, Jane; Jenkins, Cheryl; Rose, Karrie; Srivastava, Mukesh; Thompson, Paul; Tiernan, Brendan; Veterinary Science; School of Life and Environmental Sciences (SOLES); Veterinary ScienceEmergent multisystemic Enterococcus infection threatens endangered Christmas Island reptile populations, PloS One, vol.12, 7, 2017,pp 1-21
2013A fluorescence-based high-throughput screen to identify small compound inhibitors of the genotype 3a hepatitis c virus RNA polymeraseEden, John-Sebastian; Eltahla, Auda A; Lackovic, Kurt; Marquis, Christopher Peter; White, Peter A; Biological SciencesA fluorescence-based high-throughput screen to identify small compound inhibitors of the genotype 3a hepatitis c virus RNA polymerase, Journal of Biomolecular Screening, vol.18, 9, 2013,pp 1027-1034
2017Francisella tularensis subsp. holarctica in Ringtail Possums, AustraliaEden, John-Sebastian; Holmes, Edward; Shi, Mang; Sintchenko, Vitali; Ng, Jimmy; Rose, Karrie; Wang, Qinning; School of Life and Environmental Sciences (SOLES); School of Life and Environmental Sciences (SOLES); School of Life and Environmental Sciences (SOLES); Western Clinical School: Medicine (Westmead)Francisella tularensis subsp. holarctica in Ringtail Possums, Australia, Emerging Infectious Diseases, vol.23, 7, 2017,pp 1198-1201
2017Genomic and phenotypic characterization of myxoma virus from Great Britain reveals multiple evolutionary pathways distinct from those in AustraliaEden, John-Sebastian; Holmes, Edward; Kerr, Peter; Boag, Brian; Cattadori, Isabella; Fitch, Adam; Geber, Adam; Ghedin, Elodie; Liu, June; Read, Andrew; Rogers, Matthew; Sim, Derek; School of Biological Sciences; School of Life and Environmental Sciences (SOLES); School of Molecular Bioscience (SMB)Genomic and phenotypic characterization of myxoma virus from Great Britain reveals multiple evolutionary pathways distinct from those in Australia, PLoS Pathogens, vol.13, 3, 2017,pp e1006252-N/A
2017High-Resolution Metatranscriptomics Reveals the Ecological Dynamics of Mosquito-Associated RNA Viruses in Western AustraliaEden, John-Sebastian; Holmes, Edward; Shi, Mang; Imrie, Allison; Neville, Peter; Nicholson, Jay; School of Life and Environmental Sciences (SOLES); School of Life and Environmental Sciences (SOLES); School of Life and Environmental Sciences (SOLES)High-Resolution Metatranscriptomics Reveals the Ecological Dynamics of Mosquito-Associated RNA Viruses in Western Australia, Journal of Virology, vol.91, 17, 2017,pp e00680-17-N/A
2017Identification of Genetically Intact HIV-1 Proviruses in Specific CD4+ T Cells from Effectively Treated ParticipantsBarton, Kirston; Eden, John-Sebastian; Hiener, Bonnie; Horsburgh, Bethany; Lee, E; Palmer, Sarah; Schlub, Timothy; Boritz, Eli; Chomont, Nicolas; Deeks, Steven S; Douek, Daniel; Fromentin, Remi; Hecht, Frederick; Hoh, Rebecca; Liegler, Teri; Milush, Jeffrey; Odevall, Lina; Sinclair, Elizabeth; van Stockenstrom, Susanne; Westmead Clinical School: Westmead Institute for Medical Res; School of Life and Environmental Sciences (SOLES); Westmead Clinical School: Westmead Institute for Medical Res; Westmead Clinical School: Westmead Institute for Medical Res; Westmead Clinical School: Westmead Institute for Medical Res; Westmead Clinical School: Westmead Institute for Medical Res; Central Clinical School: MedicineIdentification of Genetically Intact HIV-1 Proviruses in Specific CD4+ T Cells from Effectively Treated Participants, Cell Reports, vol.21, 3, 2017,pp 813-822
2015Longitudinal sequence and functional evolution within glycoprotein E2 in hepatitis C virus genotype 3a infectionEden, John-Sebastian; Alhammad, Yousef; Butcher, Rebecca; Drummer, Heidi; Maharajh, Sanvir; Poumbourios, Pantelis; White, Peter A; Biological SciencesLongitudinal sequence and functional evolution within glycoprotein E2 in hepatitis C virus genotype 3a infection, PloS One, vol.10, 5, 2015,pp 1-19
2013Molecular epidemiology of norovirus in Singapore, 2004-2011Eden, John-Sebastian; Kun, Lee Lim; Lynette, L.E. Oon; White, Peter A; Biological SciencesMolecular epidemiology of norovirus in Singapore, 2004-2011, Journal of Medical Virology, vol.85, 10, 2013,pp 1842-1851
2016A Multi-Site Study of Norovirus Molecular Epidemiology in Australia and New Zealand, 2013-2014Eden, John-Sebastian; Hewitt, Joanne; Levy, Avram; Lim, Kun; Lun, Jennifer; Merif, Juan; Rawlinson, William; Sitabkhan, Alefiya; Smith, David; White, Peter A; Biological SciencesA Multi-Site Study of Norovirus Molecular Epidemiology in Australia and New Zealand, 2013-2014, PloS One, vol.11, 4, 2016,pp 1-19
2018No detectable effect of Wolbachia wMel on the prevalence and abundance of the RNA virome of Drosophila melanogasterEden, John-Sebastian; Holmes, Edward; Schlub, Timothy; Shi, Mang; Hoffman, Ary; White, Vanessa; School of Life and Environmental Sciences (SOLES); School of Life and Environmental Sciences (SOLES); Central Clinical School: Medicine; School of Life and Environmental Sciences (SOLES)No detectable effect of Wolbachia wMel on the prevalence and abundance of the RNA virome of Drosophila melanogaster, Proceedings of the Royal Society B: Biological Sciences, vol.285, 1883, 2018,pp 1-10
2014Nonnucleoside Inhibitors of Norovirus RNA Polymerase: Scaffolds for Rational Drug DesignEden, John-Sebastian; Eltahla, Auda A; Kelly, Andrew; Lim, Kun; Mackenzie, Jason; White, Peter; Biological SciencesNonnucleoside Inhibitors of Norovirus RNA Polymerase: Scaffolds for Rational Drug Design, Antimicrobial Agents and Chemotherapy, vol.58, 6, 2014,pp 3115-3123
2017Persistent infections in immunocompromised hosts are rarely sources of new pathogen variantsEden, John-Sebastian; Holmes, Edward; Bull, Rowena; Chisholm, Rebecca; Tanaka, Mark; White, Peter A; School of Life and Environmental Sciences (SOLES); School of Life and Environmental Sciences (SOLES)Persistent infections in immunocompromised hosts are rarely sources of new pathogen variants, Virus Evolution, vol.3, 2, 2017,pp vex018-N/A
2017Proposal for a unified classification system and nomenclature of lagovirusesEden, John-Sebastian; Mahar, Jackie; Abrantes, Joana; Alda, Fernando; Almeida, Tereza; Barcena, Juan; Bertagnoli, Stephane; Blanco, Esther; Burmakina, Galina; Celio, Alves; et al, Various; Guitton, Jean-Sebastien; Le Gall-Recule, Ghislaine; Le Pendu, Jacques; Lopes, Ana; Marchandeau, Stephane; School of Life and Environmental Sciences (SOLES); School of Life and Environmental Sciences (SOLES)Proposal for a unified classification system and nomenclature of lagoviruses, Journal of General Virology, vol.98, 7, 2017,pp 1658-1666