Browsing by Author Arthur, Jonathan

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Issue DateTitleAuthor(s)Citation
2017Automated classification and characterization of the mitotic spindle following knockdown of a mitosis-related proteinArthur, Jonathan; Chircop (nee Fabbro), Megan; Dean, Imraan M; Flores-Rodriguez, Neftali; Khushi, Matloob; Teber, Erdahl; Childrens Medical Research Institute (CMRI); Childrens Medical Research Institute (CMRI); Childrens Medical Research Institute (CMRI); Childrens Medical Research Institute (CMRI); Information Technologies; Childrens Medical Research Institute (CMRI)Automated classification and characterization of the mitotic spindle following knockdown of a mitosis-related protein, BMC Bioinformatics, vol.18, Suppl 16, 2017,pp 149-159
2008BAFF is a Biological Response Marker to IFN-beta Treatment in Multiple SclerosisArthur, Jonathan; Booth, David; Gandhi, Kaushal; Heard, Robert; McKay, Fiona Catherine; Schibeci, Stephen; Stewart, Graeme; Central Clinical School: Medicine; Western Clinical School: Westmead Millennium Institute; Western Clinical School: Westmead Millennium Institute; Behavioural and Social Sciences in Health; Western Clinical School: Medicine (Westmead); Medicine; Western Clinical School: Westmead Millennium InstituteBAFF is a Biological Response Marker to IFN-beta Treatment in Multiple Sclerosis, Journal of Interferon and Cytokine Research, vol.28,(9),2008,pp 529-540
2010Biochemical characteristics and inhibitor selectivity of mouse indoleamine 2,3-dioxygenase-2Arthur, Jonathan; Austin, Christopher; Ball, Helen; Hunt, Nicholas; Maghzal, Ghassan; Sanchez-Perez, Angeles; Stocker, Roland; Becker, K; Mailu, B.M.; Rahlfs, S; Yuasa, Hajime J.; Zocher, K; Children's Hospital Westmead: Childrens Medical Research Ins; School of Medical Sciences: Pathology; School of Medical Sciences: Pathology; School of Medical Sciences: Pathology; School of Medical Sciences: Pathology; School of Medical Sciences: Pathology; School of Medical Sciences: PathologyBiochemical characteristics and inhibitor selectivity of mouse indoleamine 2,3-dioxygenase-2, Amino Acids, vol.39, 2,pp 565-578
2017Comparative analysis of whole genome sequencing-based telomere length measurement techniquesArthur, Jonathan; Lee, Michael; Napier, Christine; Pickett, Hilda; Reddel, Roger; Yang, Fiona; Childrens Medical Research Institute (CMRI); Childrens Medical Research Institute (CMRI); Childrens Medical Research Institute (CMRI); Childrens Medical Research Institute (CMRI); Childrens Medical Research Institute (CMRI); Childrens Medical Research Institute (CMRI)Comparative analysis of whole genome sequencing-based telomere length measurement techniques, Methods, vol.114, N/A, 2017,pp 4-15
2008Computational methods for protein identification from mass spectrometry dataArthur, Jonathan; McHugh, L; Central Clinical School: Medicine; Central Clinical School: MedicineComputational methods for protein identification from mass spectrometry data, PLoS computational biology, vol.4,(2),2008,pp e12-e24
2010Differential protein expression profiling of myocardial tissue in a mouse model of hypertrophic cardiomyopathyArthur, Jonathan; Semsarian, Chris; Tsoutsman, Tatiana; Lam, Lien; Children's Hospital Westmead: Childrens Medical Research Ins; Central Clinical School: Centenary Institute; Central Clinical School: Centenary InstituteDifferential protein expression profiling of myocardial tissue in a mouse model of hypertrophic cardiomyopathy, Journal of Molecular and Cellular Cardiology, vol.48, 5, 2010,pp 1014-1022
2010A dynamic wavelet-based algorithm for pre-processing tandem mass spectrometry dataArthur, Jonathan; Wang, Penghao; Yang, Jean Yee Hwa; Yang, Pengyi; Childrens Medical Research Institute (CMRI); Mathematics & Statistics; Mathematics & Statistics; Mathematics & StatisticsA dynamic wavelet-based algorithm for pre-processing tandem mass spectrometry data, Bioinformatics, vol.26, 18, 2010,pp 2242-2249
2017Extensive Proliferation of Human Cancer Cells with Ever-Shorter TelomeresArthur, Jonathan; Dagg, Rebecca; Lau, Loretta; Napier, Christine; Neumann, Axel; Pickett, Hilda; Reddel, Roger; Sobinoff, Alexander; Teber, Erdahl; Haber, M; Henson, J; Murray, J; Reynolds, C; Childrens Medical Research Institute (CMRI); School of Molecular Bioscience (SMB); Childrens Hospital Westmead: Paediatrics & Child Health; Childrens Medical Research Institute (CMRI); Children's Hospital Westmead: Childrens Medical Research Ins; Childrens Medical Research Institute (CMRI); Childrens Medical Research Institute (CMRI); Childrens Medical Research Institute (CMRI); Childrens Medical Research Institute (CMRI)Extensive Proliferation of Human Cancer Cells with Ever-Shorter Telomeres, Cell Reports, vol.19, 12, 2017,pp 2544-2556
2009Gene expression characteristics of a cystic fibrosis epidemic strain of Pseudomonas aeruginosa during biofilm and planktonicgrowthArthur, Jonathan; Bye, Peter; Gorrell, Mark; Harbour, Colin; Hu, Honghua; Manos, Jim; Rose, Barbara; Tingpej, Pholawat; Bell, Scott; Kjelleberg, Staffan; Webb, Jeremy S; Central Clinical School: Medicine; Central Clinical School: Medicine; Central Clinical School: Centenary Institute; Central Clinical School: Medicine; Infectious Diseases; Central Clinical School: Medicine; Central Clinical School: Medicine; Central Clinical School: OfficeGene expression characteristics of a cystic fibrosis epidemic strain of Pseudomonas aeruginosa during biofilm and planktonicgrowth, FEMS Microbiology Letters, vol.292,(1),2009,pp 107-114
2010Gene expression of Pseudomonas aeruginosa in a mucin-containing synthetic growth medium mimicking CF lung sputum.Arthur, Jonathan; Fung, Carina; Harbour, Colin; Harmer, Christopher; Hu, Honghua; Manos, Jim; Naughton, Sharna; Rose, Barbara; Tingpej, Pholawat; Hassett, Daniel; Turnbull, Lynne; Whitchurch, Cynthia B; Central Clinical School: Medicine; Infectious Diseases; Central Clinical School: Medicine; Central Clinical School: Medicine; Western Clinical School: Medicine (Westmead); Central Clinical School: Medicine; Central Clinical School: Medicine; Central Clinical School: Medicine; Central Clinical School: OfficeGene expression of Pseudomonas aeruginosa in a mucin-containing synthetic growth medium mimicking CF lung sputum., Journal of Medical Microbiology, vol.59, Pt9,pp 1089-1100
2007Genetic screening of calcium regulation genes in familial hypertrophic cardiomyopathyArthur, Jonathan; Chiu, Christine; Ingles, J; Semsarian, Chris; Tebo, Molly; Lind, Joanne M.; Yeates, Laura; Central Clinical School: Medicine; Central Clinical School: Medicine; Central Clinical School: Office; Central Clinical School: Centenary Institute; Biological SciencesGenetic screening of calcium regulation genes in familial hypertrophic cardiomyopathy, Journal of molecular and cellular cardiology, vol.43,(N/A),2007,pp 337-343
2010Harvest: an open-source tool for the validation and improvement of peptide identification metrics and fragmentation explorationArthur, Jonathan; McHugh, Leo; Children's Hospital Westmead: Childrens Medical Research Ins; Central Clinical School: MedicineHarvest: an open-source tool for the validation and improvement of peptide identification metrics and fragmentation exploration, BMC Bioinformatics, vol.11, 448,pp 1-14
2008Identification and characterization of microbial proteins using peptide mass fingerprinting strategiesArthur, Jonathan; Children's Hospital Westmead: Childrens Medical Research InsIdentification and characterization of microbial proteins using peptide mass fingerprinting strategies, Methods in molecular medicine, vol.141, N/A, 2008,pp 257-270
2008Information management for proteomics: a perspectiveArthur, Jonathan; Bizannes, Paul; Doggett, Philip; Harrison, Mathew; Junius, F. Keith; McDonald, Warren; Traini, Mathew; Wilkins, Marc; Central Clinical School: MedicineInformation management for proteomics: a perspective, Expert Review of Proteomics, vol.5,(5),2008,pp 663-678
2016Is cell culture a risky business? Risk analysis based on scientist survey dataArthur, Jonathan; Capes-Davis, Amanda; Huschtscha-Holliday, Lily; Moy, Elsa Lianne; Power, Melinda; Reddel, Roger; Shannon, Mark; Eggington, Elaine; Georghiou, Ronnie; Childrens Medical Research Institute (CMRI); Medicine; Children's Hospital Westmead: Childrens Medical Research Ins; Childrens Medical Research Institute (CMRI); Children's Hospital Westmead: Childrens Medical Research Ins; Childrens Medical Research Institute (CMRI); Childrens Medical Research Institute (CMRI)Is cell culture a risky business? Risk analysis based on scientist survey data, International Journal of Cancer, vol.138, 3, 2016,pp 664-670
2017Limiting Thymic Precursor Supply Increases the Risk of Lymphoid Malignancy in Murine X-Linked Severe Combined ImmunodeficiencyAlexander, Ian; Alexander, Stephen; Arthur, Jonathan; Ginn, Samantha; Hallwirth, Claus; Liao, Sophia; Reddel, Roger; Tay, Szun; Teber, Erdahl; Cavazzana, M; Hu, Min; Lee, Hong Ching; McCormack, M; Thrasher, A; Wu, J; Childrens Medical Research Institute (CMRI); Childrens Hospital Westmead: Paediatrics & Child Health; Childrens Medical Research Institute (CMRI); Childrens Medical Research Institute (CMRI); Childrens Medical Research Institute (CMRI); Childrens Medical Research Institute (CMRI); Childrens Medical Research Institute (CMRI); Central Clinical School: Surgery; Childrens Medical Research Institute (CMRI)Limiting Thymic Precursor Supply Increases the Risk of Lymphoid Malignancy in Murine X-Linked Severe Combined Immunodeficiency, Molecular Therapy - Nucleic Acids, vol.6, N/A, 2017,pp 1-14
2017MatCol: A tool to measure fluorescence signal colocalisation in biological systemsArthur, Jonathan; Khushi, Matloob; Napier, Christine; Reddel, Roger; Smyth, Christine; Childrens Medical Research Institute (CMRI); Information Technologies; Childrens Medical Research Institute (CMRI); Childrens Medical Research Institute (CMRI); Childrens Medical Research Institute (CMRI)MatCol: A tool to measure fluorescence signal colocalisation in biological systems, Scientific Reports, vol.7, 1, 2017,pp 1-9
2010Modeling Single Nucleotide Polymorphisms in the Human AKR1C1 and AKR1C2 Genes: Implications for Functional and Genotyping AnalysesArthur, Jonathan; Reichardt, Juergen; Children's Hospital Westmead: Childrens Medical Research Ins; School of Medical Sciences: School of Medical SciencesModeling Single Nucleotide Polymorphisms in the Human AKR1C1 and AKR1C2 Genes: Implications for Functional and Genotyping Analyses, PLoS One, vol.5, 12,pp e15604-1-e15604-9
2010Novel approaches to detect serum biomarkers for clinical response to interferon-beta treatment in multiple sclerosis.Arthur, Jonathan; Booth, David; Crossett, Ben; Diefenbach, Eve; Gandhi, Kaushal; Heard, Robert; McKay, Fiona Catherine; Schibeci, Stephen; Stewart, Graeme; Central Clinical School: Medicine; Western Clinical School: Westmead Millennium Institute; School of Molecular Bioscience; Sydnovate; Western Clinical School: Westmead Millennium Institute; Western Clinical School: Medicine (Westmead); Western Clinical School: Westmead Millennium Institute; Medicine; Western Clinical School: Westmead Millennium InstituteNovel approaches to detect serum biomarkers for clinical response to interferon-beta treatment in multiple sclerosis., P L o S One, vol.5, 5,pp e10484 - 1-e10484 - 9
2011Predicting Peptide binding affinities to MHC molecules using a modified semi-empirical scoring functionArthur, Jonathan; Liao, Webber; Children's Hospital Westmead: Childrens Medical Research Ins; Central Clinical School: MedicinePredicting Peptide binding affinities to MHC molecules using a modified semi-empirical scoring function, PLoS One, vol.6, 9, 2011,pp e25055-1-e25055-8